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This month’s Genome Watch article discusses the role of within-host adaptive evolution in bacterial pathogens for
colonization and invasion of their human hosts.
Such parallel evolution implied within-host
adaptations that may promote efficient colonization.
Within-host evolution of Helicobacter pylori shaped by area of interest-particular adaptation, intragastric migrations and selective sweeps.
A mutation burst in the course of the acute part of Helicobacter pylori infection in humans and rhesus macaques.
Similar to observations by Bartell et al.1, Pandey et al.2 additionally discovered speedy evolution early in the infection process, whereby nucleotide substitution rates were 15 instances higher throughout quick-time period
infection (1 month) than lengthy-time period infection (6 months).
For example, Pandey et al.2 studied 149 healthy volunteers who have been intranasally inoculated with Neisseria lactamica, a harmless commensal, and collected samples from each person at 2, 4, 8, 16 and 26 weeks.
Through comparative genomic evaluation of the sequenced
isolates, they identified multiple convergent mutations in part-variable
loci that encode, for example, outer membrane proteins
(OMPs) vital for host-microorganism interactions and
nutrient uptake2. This examine highlighted that inside-host adaptation is
important, advanced and affects multiple infection-relevant phenotypes.
Such evolution and adaptation will be tracked in real time using whole-genome
sequencing (WGS) of sequential samples. Using a combination of genomic analysis and statistical modelling, they confirmed early fast inside-host adaptation throughout the first 2 years
of infection and identified variants associated with naive and tailored states1. -
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